Hb_001425_120

Information

Type -
Description -
Location Contig1425: 157838-158688
Sequence    

Annotation

kegg
ID pxb:103947783
description isoprenylcysteine alpha-carbonyl methylesterase ICME-like
nr
ID XP_012088153.1
description PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JK54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25662 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001425_120 0.0 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
2 Hb_002301_020 0.1393943369 transcription factor TF Family: NAC NAC transcription factor [Hevea brasiliensis]
3 Hb_000548_040 0.1482081302 rubber biosynthesis Gene Name: CPT1 cis-prenyltransferase1 [Hevea brasiliensis]
4 Hb_004545_150 0.1628420915 - - PREDICTED: paramyosin [Jatropha curcas]
5 Hb_000270_420 0.163540389 - - actin binding protein, putative [Ricinus communis]
6 Hb_007810_060 0.1638407086 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000571_070 0.1643077282 transcription factor TF Family: G2-like PREDICTED: putative Myb family transcription factor At1g14600 [Jatropha curcas]
8 Hb_000720_180 0.1650351319 - - -
9 Hb_001140_160 0.166679696 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
10 Hb_000002_390 0.1678892138 - - DNA binding protein, putative [Ricinus communis]
11 Hb_072912_010 0.1682576394 - - PREDICTED: uncharacterized protein LOC105641750 [Jatropha curcas]
12 Hb_027751_020 0.1715122731 - - PREDICTED: uncharacterized protein LOC104886652 [Beta vulgaris subsp. vulgaris]
13 Hb_010931_100 0.1781701595 - - PREDICTED: uncharacterized protein LOC105638669 [Jatropha curcas]
14 Hb_010872_060 0.1786240667 transcription factor TF Family: MYB Duplicated homeodomain-like superfamily protein, putative [Theobroma cacao]
15 Hb_000707_080 0.1796182956 - - hypothetical protein AALP_AA4G156500, partial [Arabis alpina]
16 Hb_000563_540 0.1799803294 - - PREDICTED: Fanconi anemia group I protein [Jatropha curcas]
17 Hb_001315_020 0.1813393266 - - ring finger protein, putative [Ricinus communis]
18 Hb_001631_070 0.1820987789 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
19 Hb_005488_100 0.183243168 - - hypothetical protein JCGZ_00295 [Jatropha curcas]
20 Hb_000957_040 0.1850480213 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Jatropha curcas]

Gene co-expression network

sample Hb_001425_120 Hb_001425_120 Hb_002301_020 Hb_002301_020 Hb_001425_120--Hb_002301_020 Hb_000548_040 Hb_000548_040 Hb_001425_120--Hb_000548_040 Hb_004545_150 Hb_004545_150 Hb_001425_120--Hb_004545_150 Hb_000270_420 Hb_000270_420 Hb_001425_120--Hb_000270_420 Hb_007810_060 Hb_007810_060 Hb_001425_120--Hb_007810_060 Hb_000571_070 Hb_000571_070 Hb_001425_120--Hb_000571_070 Hb_000155_070 Hb_000155_070 Hb_002301_020--Hb_000155_070 Hb_000442_030 Hb_000442_030 Hb_002301_020--Hb_000442_030 Hb_000563_540 Hb_000563_540 Hb_002301_020--Hb_000563_540 Hb_005488_100 Hb_005488_100 Hb_002301_020--Hb_005488_100 Hb_002301_020--Hb_000571_070 Hb_010931_100 Hb_010931_100 Hb_002301_020--Hb_010931_100 Hb_000002_390 Hb_000002_390 Hb_000548_040--Hb_000002_390 Hb_002027_300 Hb_002027_300 Hb_000548_040--Hb_002027_300 Hb_012347_010 Hb_012347_010 Hb_000548_040--Hb_012347_010 Hb_000957_040 Hb_000957_040 Hb_000548_040--Hb_000957_040 Hb_000707_080 Hb_000707_080 Hb_000548_040--Hb_000707_080 Hb_004545_150--Hb_010931_100 Hb_002609_260 Hb_002609_260 Hb_004545_150--Hb_002609_260 Hb_002989_080 Hb_002989_080 Hb_004545_150--Hb_002989_080 Hb_000264_190 Hb_000264_190 Hb_004545_150--Hb_000264_190 Hb_004545_150--Hb_005488_100 Hb_004545_150--Hb_000563_540 Hb_003060_070 Hb_003060_070 Hb_000270_420--Hb_003060_070 Hb_002067_160 Hb_002067_160 Hb_000270_420--Hb_002067_160 Hb_000270_420--Hb_000571_070 Hb_000270_420--Hb_005488_100 Hb_001476_100 Hb_001476_100 Hb_000270_420--Hb_001476_100 Hb_002477_260 Hb_002477_260 Hb_000270_420--Hb_002477_260 Hb_007810_060--Hb_002989_080 Hb_007810_060--Hb_002301_020 Hb_000914_060 Hb_000914_060 Hb_007810_060--Hb_000914_060 Hb_007810_060--Hb_000155_070 Hb_007810_060--Hb_000270_420 Hb_027751_020 Hb_027751_020 Hb_000571_070--Hb_027751_020 Hb_000571_070--Hb_000563_540 Hb_000571_070--Hb_000264_190 Hb_000571_070--Hb_002609_260 Hb_002301_320 Hb_002301_320 Hb_000571_070--Hb_002301_320 Hb_000571_070--Hb_010931_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
150.347 0.605847 0.179046 4.89143 29.2914 107.348
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
78.3954 30.847 94.3192 9.49 0

CAGE analysis